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CDST_LT: Maintaining supplies of lab consumables at the DMC

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  • Consumables required at a DMC

    Content
    • Designated Microscopy Centres (DMCs) are the most peripheral laboratory under the National TB Elimination Programme (NTEP) network.
    • Any person identified to be a presumptive TB patient is first referred to the nearest DMC for sputum examination or their sputum specimens are collected and transported to the DMC. Therefore, it is very important for the DMCs to maintain an adequate stock of reagents and other consumables.
    • The Medical Officer (MO) of DMC is responsible for determining the number of reagents and other materials the DMC needs every month.
    • The Senior Tuberculosis Laboratory Supervisor (STLS) ensures these supplies are distributed in a timely manner, as and when required.
    • The Lab Technician (LT) is responsible for exhausting the old supplies before the new ones.

     

    The consumables required at the DMC can be broadly categorised as:

    1. Consumables required for sputum collection
    2. Consumables required for slide preparation
    3. Consumables required for smear examination
    4. Consumables stationery
    5. Other
    Table: List of Items with Technical Specifications of Laboratory Consumables Required for DMCs
    Sl. No. Name of the item                                 Technical Specifications
    1. For Sputum collection
    Sputum containers Cups made of Special Medical Grade Polypropylene, thin plastic, translucent, diameter - 4 cm, capacity - 30 ml, the screwable cap should also be made of Special Medical Grade Polypropylene and should be airtight and leak-proof.
    Absorbent cotton 500 gms/roll
    Phenolic compound 5% phenol/ 40% phenolic compound (proprietary Phenyl) diluted to 5%
    Adhesive labels for sputum containers  
    Sputum specimen transport box Insulated box, made of plastic 10” x 10” x 10”, thickness 1” with lid, handle and nylon belt 1” width 2.5 feet length, nylon strap of 1” width 2 feet length with velcro to strap the lid of the box from side to side.
    1. For slide preparation
    Slides for Microscopes Glass slides plain, size = 76mm x 26mm x 1.3mm, clean, scratch-free with smooth edges, uniform refractive index, pack of 50.
    Broomstick 10 cms in length and thick enough to make good smears.
    Diamond marker pencil 6" (15.24 cm.) holder with artificial diamond (hard stone) embedded at one end with a screw cap, to mark on microscope glass slides.
    Grease marking pencil Marking pencil MPS, blue or red coloured, 8" length, to write on glassware/ metal surfaces.
    Staining racks For drying the slides.
    Slide boxes for storing slides  
    Glass (or metal) rods For holding slides during the staining process.
    Forceps, Chitel forceps Stainless steel for slides, 15 cm.
    Scissors 25 cm, stainless steel
    Ziehl Neelsen stain  
    Auramine O fluorescent dye for Fluorescence Microscopy (FM) Wherever FM is being done
    Whatman filter paper No 1  
    3 ) For smear examination
    Binocular Microscope With 10x, 40x and oil immersion objective (100x) eyepieces (10x) and spare bulbs and fuses.
    Immersion oil  
    Filter paper To drain the oil from the slides.
    Fine Silk and Lint cloth  
    Lens paper For wiping the oil immersion lens after examination of each slide
    4) Consumables - Stationery  
    Request form for examination of biological specimen for sputum examination  
    TB Laboratory Register  
    Referral/ Transfer form for treatment  
    Stock register – laboratory  
    Marker pen  
    5 ) Other
    Plastic tumblers/ mugs  
    Time (stop-watch)  
     Spirit lamp or Bunsen burner  
    Silica gel  Hygroscopic agent to maintain the microscope in a moisture-free environment (to be placed in the cabinet for Binocular Microscope).
    Alcohol (absolute) Ethanol
    Cotton, full sleeves Aprons  
    Disposable gloves 6 and 8 inches 
    Methylated spirit

     

     

     

    Resources

    • Training Module (1-4) for Program Managers and Medical Officers, NTEP, MoHFW, 2020. 
    • Guidelines for Quality Assurance of Smear Microscopy for Diagnosing Tuberculosis, RNTCP Lab Network, CTD, MoHFW, India, 2005. 
    • Module for Laboratory Technicians, CTD, MoHFW, India, 2005.

     

    Assessment

    Question​ Answer 1​ Answer 2​ Answer 3​ Answer 4​ Correct answer​ Correct explanation​ Page id​ Part of Pre-test​ Part of Post-test​
    Sputum containers and their screwable cap used for sputum collection at the DMC should be made of Special Medical Grade Polypropylene and should be air-tight.  True False     1 Sputum containers and their screwable cap used for sputum collection at the DMC should be made of Special Medical Grade Polypropylene and should be air-tight and leakproof. ​ Yes Yes
    Who ensures that supplies are distributed in a timely manner at DMCs? Treatment Supporter Medical Officer Senior Tuberculosis Laboratory Supervisor (STLS) Lab Technician (LT) 3

     

    The Senior Tuberculosis Laboratory Supervisor (STLS) ensures these supplies are distributed in a timely manner, as and when required.

      Yes Yes
  • Stock Register at a DMC

    Content
    • Designated Microscopy Centres (DMCs) are the most peripheral laboratory under the National TB Elimination Programme (NTEP) network. Therefore, it is very important for the DMCs to maintain an adequate stock of all consumables.
    • A paper-based stock register is maintained at the DMC and submitted as a part of the ‘Monthly report on programme management, logistics and microscopy’.
    • All the DMCs as well as Peripheral Health Institute (PHI) that are a DMC need to fill the second part of this monthly report format for reporting the status of laboratory consumables and equipment (Figure below).

    Figure: Monthly report format for reporting status of laboratory consumables and equipment, to be filled by PHI that is DMC.

     

    • The stock register for consumables at the DMC has the provision to enter the information about the stock of consumables that are available at the DMC on the first day of the month, stock received and consumed during the month and stock remaining on the last day of the month along with the requested quantity of new stock.
    • The Lab Technician (LT) of the DMC is responsible for exhausting the old supplies before the new ones.
    • The Medical Officer (MO) of the DMC is responsible for determining the stocks and the Senior Tuberculosis Lab Supervisor (STLS) should ensure these supplies are distributed in a timely manner, as and when required.

     

    Table: Calculation of Stocks Required at the DMC

    Sputum containers

    For diagnosis:

    • During the first week of each quarter, the number of new smear-positive cases registered and treated during the last quarter should be determined and this number should be multiplied by 10.
    • Ten is the average number of symptomatic required to be examined for detecting one case of new pulmonary smear-positive tuberculosis.
    • Since two sputum specimens are taken for each symptomatic patient, further multiply the number obtained above by 2.

    For follow-up:

    • Two follow-up specimens are taken for the majority of patients - one at the end of the intensive phase and the other at the end of treatment. One sputum container is needed for each follow-up.
    • Once the number of sputum containers required has been calculated, allow sufficient reserve stock for three months, add 10% to account for wastage of sputum containers, and account for the sputum containers in stock.
    • On the last working day of the quarter, count the number of sputum containers in stock and subtract from that needed for diagnosis and follow-up examinations as calculated above.
    Slides
    • Once the number of sputum containers needed for the next quarter is determined, order a slightly higher number of slides than the required no. of sputum containers to account for unavoidable breakage of slides. 
    Reagents
    • Reagents are supplied to the DMCs on monthly basis by the District TB Centre (DTC).
    • The stock register should have the mention of expiry dates of the reagents and the first expiring reagents must be exhausted first based on the First Expiry First Out (FEFO) principle.
    • The reagents should not be used beyond three months from the date of preparation.

    CBNAAT/ Truenat Machines and Cartridges/ Chips

     

    • These are procured centrally and supplied to state/ district/ sites based on their requirement.
    • Recording, reporting and monitoring of cartridges/ chips is done through Nikshay-Aushadhi and they are supplied based on the stock availability, consumption and expected case load.
    Binocular Microscopes (BM) and LED Fluorescence Microscopes (FM)
    • 1 BM is required for every DMC.
    • The no. of BM in place and no. of BM in working condition should be reported in the stock register.
    • LED FM is supplied to the high case load facilities where the workload is more than 25 slides per day.
    Tuberculosis Laboratory Register
    • Each TB lab register allows for the registration of at least 2000 patients.
    • For each lakh population, 75 smear-positive patients are projected, requiring the examination of 750 patients (thrice each). Additional follow-up examinations will bring the number of registers needed to approximately one lab register/ lakh.
    • If there are blank pages in the register at the end of a year, it can be used the following year. However, every year should be started on a new page.
    Laboratory Form for Sputum Examination
    • For diagnosis, approximately 10 laboratory forms for sputum examination are needed. (10 is the average number of symptomatic for each case of pulmonary smear-positive tuberculosis identified).
    • For follow-up, approximately 0.2 laboratory forms for sputum examination are needed for each pulmonary tuberculosis case. (1 out of 10 examined will be smear-positive, each needs two forms for follow-up. When calculated, out of 10 it will be 0.2)

     

    Resources

    • Training Modules (1-4) for Programme Managers and Medical Officers, CTD, MoHFW, GoI, 2020.
    • Module for STS Part 2: Ensuring Proper Registration and Reporting. CTD, MoHFW, India.

     

    Assessment

    Question​ Answer 1​ Answer 2​ Answer 3​ Answer 4​ Correct answer​ Correct explanation​ Page id​ Part of Pre-test​ Part of Post-test​
    How many TB Laboratory Register/s is/are required in one year for each DMC? 1 2 3 4 1 Each Tuberculosis Laboratory Register allows for the registration of at least 2000 patients. For each lakh, 75 smear-positive patients are projected, requiring the examination of 750 patients (thrice each). Additional follow-up examinations will bring the number of registers needed to approximately one lab register/ DMC. ​ Yes Yes

     

    For follow-up, approximately 0.2 laboratory forms for sputum examination are needed for each pulmonary tuberculosis case.

    True False     1

     

    For diagnosis, approximately 10 laboratory forms for sputum examination are needed. 10 is the average number of symptomatic for each case of pulmonary smear-positive tuberculosis identified. 1 out of 10 examined will be smear-positive, each needs two forms for follow-up. When calculated, out of 10 it will be 0.2

     

     

    Yes

     

    Yes

     

  • Indenting Supplies at a DMC

    Content

    The Medical Officer (MO) of Designated Microscopy Centre (DMC) is responsible for determining the amount of reagents and other materials the DMC needs every month.

    The Senior TB Laboratory Supervisor (STLS) will make sure these supplies are distributed in a timely manner, usually on a monthly basis or as and when required.

    • STLS place an order for DMC reagents and consumable four times a year based on the approximate number of sputum specimens the laboratory examined in the previous quarter.
    • The STLS should order the sputum containers during the first week of the quarter so that the health units and microscopy laboratories have enough sputum containers to collect sputum specimens and the microscopy laboratories have enough slides to conduct sputum smear examinations.

    The calculation of reagents/ consumables required for examination of 3000 smears is shown in Table 1.

    Reagents/ Equipment for staining

    Quantity

    Binocular microscope with 10x, 40x and oil immersion objective (100x) eyepieces (10x) and spare bulbs and fuses

     

    At least 1 per DMC

    Plastic disposable sputum containers

    3,300

    Slides for microscope, 25*75 mm, 1.1 mm-1.3 mm Thick

     

    3,300

    Broom stick 10 cms length

    3,300

    Diamond marker pencil

    3 number

    Timer, 30 or 60 minutes

    1 number

    Forceps, Chitel forceps stainless steel for slides 15 cm

    1 number

    Scissors, 25 cm stainless steel

    1 number

    Slide rack, Staining slide rod of metal or plastic or glass for 12 slides

    2 numbers

     

    Slide boxes, For 100 slides

    33 boxes + 2 per DMC for RBRC

    Tissue rolls

    4 numbers

    Marker pen

    12

    Absorbent cotton, 500 gms/ roll

    4 numbers (2 k.g)

    Pressure cooker, For disposal by autoclaving

    Optional

    Phenol with concentration mentioned on the bottle

    80 litres

    Methylated spirit

    3 litres

    Cotton, full sleeves aprons

    2

    Disposable gloves, 6 and 8 inches (box of 25 pairs)

    12 boxes

    Spirit lamp with wicks

    1 number

    Metal wire, for swab for heating Carbol fuchsin

    1 number

    Sputum specimen transport box, Insulated box, made of plastic 10” x 10” x 10”, thickness 1” with  lid, handle and nylon belt 1” width 2.5 feet length, nylon strap of 1” width 2 feet length with Velcro to strap the lid of the box from side to side.

     

     

    2 numbers

    Table 1: Calculation of Consumables Required at DMC for Examination of 3000 Smears; Source: Training Modules for Programme Managers and Medical Officers

    • The monthly report on Programme Management, Logistics and Microscopy at the Peripheral Health Institution (PHI) level are filled by DMCs which are PHI as shown in Table 2.

     

    Laboratory Consumables (To be filled in by only PHIs which are a DMC)

    Item

    Unit of Measurement

    Stock on first day of Month

    Stock received during Month

    Consumption during Month

    Stock on last day of Month

    Quantity requested

    Sputum containers*

    Nos.

     

     

     

     

     

    Universal containers for C & DST

    Nos

     

     

     

     

     

    Slides

    Nos.

     

     

     

     

     

    Carbol Fuchsin (1% solution)

    Litres

     

     

     

     

     

    Methylene Blue (0.1% solution)

    Litres

     

     

     

     

     

    Sulphuric Acid (25% solution)

    Litres

     

     

     

     

     

    Phenolic solution(for disinfection-~40% pure solution)

    Litres

     

     

     

     

     

    Immersion oil/Liquid Paraffin (Heavy)

    mL

     

     

     

     

     

    Methylated Spirit

    Litres

     

     

     

     

     

    * PHIs that are not a DMC, but have been supplied with sputum containers, should complete this row.

     

    Table 2: Request for Laboratory Consumables and Reagents in monthly reports from PHI which are DMCs; Source: Monthly Report on Programme Management, Logistics and Microscopy Peripheral Health Institution Level

    • The DMC reagents and consumables are budgeted in the District Annual Action Plan under laboratory materials as per the amount permissible based on District Performance in the last four quarters.
    • Procurement planned during a financial year is based on last year’s specimen processed/ slides examined and amount spent for purchase of lab material for smear microscopy.

     

    Resources

    1. Training Modules for Programme Managers and Medical Officers.
    2. Monthly Report on Programme Management, Logistics and Microscopy
      Peripheral Health Institution Level (https://tbcindia.gov.in/showfile.php?lid=3055)

    Assessment

    Question

    Answer 1

    Answer 2

    Answer 3

    Answer 4

    Correct answer

    Correct explanation

    Page id

    Part of Pre-test

    Part of Post-test

    The MO of the DMC is responsible for determining the amount of reagents and other materials the DMC needs every month.

    True

    False

     

     

    1

    The MO of DMC is responsible for determining the amount of reagents and other materials the DMC needs every month.

     

    Yes

    Yes

  • Preparation of Reagents for ZN Microscopy

    Content

    The National TB Elimination Program (NTEP) recommends freshly preparing reagents from commercial procured products, at the District TB units to be used for microscopy. Chemicals need to be carefully monitored for potency and the calculation needs to be accurate while preparing reagents for smear microscopy.

     

    For Preparing 1% Carbol Fuchsin (500ml): The required chemicals and materials for preparing 500 ml Carbol Fuchsin are:

    1. Basic Fuchsin

    • Chemical name: Pararosaniline hydrochloride 
    • Chemical structure: C19H18N3Cl
    • Molecular Wt: 323.8
    • Colour: Metallic green

    Potency correction factor: Note down the dye content – this should be available on the container. The dye content should be approximately 85% - 88%. To calculate the required amount of basic fuchsin, divide the actual amount required by the dye content. For example: dye content = 85%, actual amount required = 5gms, required amount of dye = 5/0.85 = 5.88 gms.

    2. Ethyl Alcohol: 50 ml (Absolute alcohol, purity must be 98-100%)

    3. Carbolic acid crystals (Phenol): 25 gms

    • Chemical name: Phenol
    • Chemical structure: C6H5OH
    • Molecular Wt: 94.11
    • Melting point: 40°C+2.5

    4. Distilled purified water: 500 ml

     

    Steps for Preparing 1% Carbol Fuchsin (500ml)

    1. Add 25 gms of phenolic crystals to a conical flask
    2. Add 50ml ethanol
    3. Mix well until the crystals completely dissolves. Add 50 ml distilled water if required.
    4. Conical flask should be kept in water bath set at 60°C or in a trough containing warm water
    5. Weigh required amount of basic fuchsin powder and transfer it into a conical flask
    6. Mix well until the crystals dissolve well.
    7. Make the total volume to 500ml by adding distilled water
    8. Filter using Whattman filter paper and transfer into a bottle
    9. Label as 1% Carbol Fuchsin - Primary stain
    10. Date of preparation, date of expiry, batch no. and the name of the technician or STLS who has prepared the stain should be clearly mentioned on the bottle.
    11. Store it in cool place, away from direct sunlight
    12. Any time particles start to form in the Carbol Fuchsin solution, the solution must be filtered again

     

    For Preparing 25% Sulphuric Acid (500ml):

    • Chemical structure: H2SO4
    • Molecular wt: 98.08
    • Purity: 95-97%
    • Colour: Clear
    1. Measure 375ml distil water into a 1L flask
    2. In a glass cylinder, measure 125ml concentrated Sulphuric Acid. Pour it slowly and gently into the conical flask containing distilled water. Note: Always add acid to water. Never add water to acid
    3. To dissipate the heat generated, place the flask in a trough of water
    4. Mix well
    5. Allow to cool
    6. Transfer into a bottle
    7. Label as 25% Sulphuric Acid - Decolorizing Solution
    8. Date of preparation, date of expiry, batch no. and the name of the technician or STLS who has prepared the solution should be clearly mentioned on the bottle.

     

    For preparing 0.1% Methylene Blue (500ml):

    • Chemical name: Methylthionine chloride
    • Chemical structure: C16H18ClN3S
    • Molecular Wt: 319.9

     

    Potency correction factor: Note down the dye content – this should be available on the container. The dye content should be approximately 82%. To calculate the required amount of methylene blue, divide the actual amount by the dye content. For example: dye content = 82%, actual amount required = 0.5gms, required amount of dye = 0.5/0.82 = 0.61 gms.

    • Weigh the required amount of Methylene Blue
    • Dissolve it in 500ml distilled water
    • Transfer into a bottle
    • Label as 0.1% Methylene Blue
    • Date of preparation, date of expiry, batch no. and the name of the person who prepared the solution should be clearly written on the bottle.

     

    Table: Preparation of different volumes of stains for ZN microscopy

    Ziehl-Neelsen method

    Quantity of reagent for 5L

    Quantity of reagent for 1L

    Quantity of reagent for 500 ml

    Quantity of regent for 100 ml

    Basic fuchsin (dye content/purity if 85%)

     

    58.8 g

    11.76 g

    5.88 g

    1.17 g

    Alcohol

    500 ml

    100 ml

    50 ml

    10 ml

    Phenol crystals

    250 g

    50 g

    25 g

    5 g

    Distilled water

    To make final volume 5000 ml

    To make final volume 1000 ml

    To make final volume 500 ml

    To make final volume 100 ml

    Carbol-fuchsin 1%

     

     

     

     

    Sulfuric acid

    1250 ml

    250 ml

    125 ml

    25 ml

    Distilled water

    3750 ml

    750 ml

    375 ml

    75 ml

    H2SO4 25%

     

     

     

     

    Methylene blue (dye content if 82%)

     

    6.1 g

    1.22 g

    0.61 g

    0.12 g

    Distilled water

    5000 ml

    1000 ml

    500 ml

    100 ml

    Methylene blue 0.1%

     

     

     

     

     

    Always perform a quality check of the reagents prepared by using Quality Control Positive and Quality Control Negative. If purity is not available on the reagent bottle, then search the website of the company of which the reagent was procured or ask the company about the certificate mentioning about the purity of reagent

     

    Please watch the video below for more information:

    Video file

     

    Resources

     

    • Module for Laboratory Technicians (RNTCP), Central TB Division, MoHFW, 2005
    • TB Lab Consumables Specifications 2019
    • SoP for preparation of Laboratory Reagents - WHO
    • Laboratory Diagnosis of Tuberculosis by Sputum Microscopy, GLI Initiative

     

    Kindly provide your valuable feedback on the page to the link provided HERE

  • Preparation of Reagents for FM Microscopy

    Content

    Reagent preparation is an important activity and it’s essential to use certified chemicals and reagents. One should always check the potency of the chemicals used and calculate the amount to be weighed accordingly.

     

    The following are the steps for reagent (primary stain and counter stain) preparation for Florescence Microscopy:

     

    0.1% Auramine–O (1 L), the primary stain

    • Weigh 1 gm Auramine–O and transfer to conical flask.
    • Add 30 gm Phenolic crystals (99.5% purity) and mix well.
    • Add 100 ml absolute Ethanol (98-100% purity) and mix well.
    • Add 870 ml distilled water to make up final volume of 1 L.
    • Filter and transfer to amber bottle.
    • Label the bottle as 0.1% Auramine–O.
    • Date of preparation, date of expiry, batch no. and name of the Senior TB Lab Supervisor (STLS) who has prepared the stain should be clearly mentioned on the bottle.

     

    1% Acid Alcohol (1 L) to decolorize

    • Dissolve 5 gm Sodium chloride in 250 ml distilled water.
    • Add 5 ml concentrated hydrochloric acid.
    • Mix with 750 ml absolute alcohol.
    • Always add acid slowly to alcohol, not vice-versa.
    • Store in amber coloured bottle.
    • Label the bottle as 1% Acid Alcohol.
    • Date of preparation, date of expiry, batch no. and name of the STLS who has prepared the stain should be clearly mentioned on the bottle.

     

    0.5% Potassium Permanganate, KMnO₄ (1 L), the counter stain

    • Weigh 5 gm of Potassium permanganate (99.5% purity).
    • Transfer to a conical flask.
    • Take 1 L of distilled water.
    • Add small amounts of distilled water tothe  conical flask containing KMnO₄ and mix well.
    • Add the remaining distilled water to make up final volume of 1 L.
    • Filter and transfer to a bottle.
    • Label the bottle as 0.5% Potassium permanganate.
    • Date of preparation, date of expiry, batch no. and name of the STLS who has prepared the stain should be clearly mentioned on the bottle.

     

    Table: Preparation of Different Volumes of Stains for FM Microscopy

    AURAMINE METHOD

    QUANTITY OF REAGENT FOR 5 L

    QUANTITY OF REAGENT FOR 1 L

    QUANTITY OF REAGENT FOR 500 ML

    QUANTITY OF REAGENT FOR 100 ML

    Auramine

     

    Ethanol

     

    Phenol

     

    Distilled water

     

    0.1% Auramine

    5.0 g

     

    500 ml

     

    150.0 g

     

    To make final volume 5000 ml

     

    1.0 g

     

    100 ml

     

    30.0 g

     

    To make final volume 1000 ml

     

    0.5 g

     

    50 ml

     

    15.0 g

     

    To make final volume 500 ml

     

    0.1 g

     

    10 ml

     

    3.0 g

     

    To make final volume 100 ml

     

    Hydrochloric acid

     

    Sodium chloride

     

    Ethanol

     

    Distilled water

     

    1% Acid–alcohol

    25 ml

     

    25.0 g

     

    3750 ml

     

    1250 ml

     

     

    5 ml

     

    5.0 g

     

    750 ml

     

    250 ml

     

     

    2.5 ml

     

    2.5 g

     

    375 ml

     

    125 ml

     

     

    0.5 ml

     

    0.5 g

     

    75 ml

     

    25 ml

     

     

    Potassium permanganate

     

    Distilled water

     

    0.1% Potassium permanganate

    25.0 g

     

    5000 ml

     

     

     

    5.0 g

     

    1000 ml

     

     

     

    2.5 g

     

    500 ml

     

     

     

    0.5 g

     

    100 ml

     

     

     

    Video file

    Resources

     

    • TB Lab Consumables Specifications, 2019.
    • SOP for Preparation of Laboratory Reagents - WHO.

     

    Kindly provide your valuable feedback on the page to the link provided HERE

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